BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023A05SP1|AL427984
(929 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1683 1707 0.0
>3x_Contig1683
Length = 16378
Score = 1707 bits (856), Expect = 0.0
Identities = 911/930 (97%), Gaps = 3/930 (0%)
Strand = Plus / Plus
Query: 1 gatcttcaaaaaaaatttggaatttacatatatggtttgatatgtaacaaggaagaggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4965 gatcttcaaaaaaaatttggaatttacatatatggtttgatatgtaacaaggaagaggaa 5024
Query: 61 caagaagacaagacttagaatattcgaggataaaggg-ctgtaacattaagaacagcctt 119
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5025 caagaagacaagacttagaatattcgaggataaaggggctgtaacattaagaacagcctt 5084
Query: 120 ttttaagtgacaatacaggaaaactgataacatgagtsatccgacctggtgcgataaatc 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5085 ttttaagtgacaatacaggaaaactgataacatgagtgatccgacctggtgcgataaatc 5144
Query: 180 gctatggcctcaaattagtgttgcttcaggagggatttcgtttttaacttcgttcgtcgc 239
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5145 gctatggcctcaaattagtgttgcttcaggagggatttcgtttttcacttcgttcgtcgc 5204
Query: 240 tcaaatcccacaactgawagaaacttatcgtgacaagagtgttgaagggttatcaccagg 299
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 5205 tcaaatcccacaactgatagacacttatcgtgacaagagtgttgaagggttatcaccagg 5264
Query: 300 atttctattatgctggcttttcggggatataaccagtttaattggagcygtacttactca 359
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5265 atttctattatgctggcttttcggggatataaccagtttaattggagctgtacttactca 5324
Query: 360 tcaactcccattccagattcttttggcagtttattatttgtctaatgacatgttgatatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5325 tcaactcccattccagattcttttggcagtttattatttgtctaatgacatgttgatatg 5384
Query: 420 tggtcaatactattacyacggtattttacaccggaatcagcyagcgactccaggccatga 479
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5385 tggtcaatactattactacggtattttacaccggaatcagctagcgactccaggccatga 5444
Query: 480 gtctgccactttagaagaacgaacacgtttggtacgaagccgtggttcaaaccccagtat 539
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5445 gtctgctactttagaagaacgaacacgtttggtacgaagccgtggttcaaaccccagtat 5504
Query: 540 tcaattgcmacgcgggttcaaatggtggatcttatcattcttcgtcagtcagcctggaac 599
|||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5505 tcaattgc-acgcgggttc-aatggtggatcttatcattcttcgtcagtcagcttggaac 5562
Query: 600 tgttcaagggttcccgatgcctgtcgtgtccattgctcaagccattactggatccgaaac 659
||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 5563 tgttcaagggttcccgatgcctgtcgtgtccatggctcaagccattactggacccgaaac 5622
Query: 660 agtttttccgtttagtaagcaccgtccgtcgcccgttgtgcctattgaaccaccccatac 719
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 5623 agtttttccgtttagtaagcaccgtccgtcgcccgttttgcctattgaaccaccccatat 5682
Query: 720 aagctttattggtcaattggcatcctgggtcggagcaatgtcctatttctgtgccagaat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5683 aagctttattggtcaattggcatcctgggtcggagcaatgtcctatttctgtgccagaat 5742
Query: 780 tccacaattgatcaagaattacaaaaggaagagtactgatgggctttcaccccycctctt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 5743 tccacaattgatcaagaattacaaaaggaagagtactgatgggctttcacccctcctctt 5802
Query: 840 tataagtacgttaattgcaaatgtcacatacacactatccattttcaccagttgctctta 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5803 tataagtacgttaattgcaaatgtcacatacacactatccattttcaccagttgctctta 5862
Query: 900 tctcacagatgagggcaagctaggkttcgt 929
|||||||||||||| ||||||||| |||||
Sbjct: 5863 tctcacagatgaggacaagctaggtttcgt 5892
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6030
Number of Sequences: 1807
Number of extensions: 6030
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 929
length of database: 10,358,551
effective HSP length: 16
effective length of query: 913
effective length of database: 10,329,639
effective search space: 9430960407
effective search space used: 9430960407
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)